mashup

Semantic Biomedical Mashups with Connotea


Mashup or Shutup

The Journal of Biomedical Informatics (JBI), will soon be publishing their special issue on Semantic Biomedical Mashups (can you fit any more buzzwords into a Call For Papers?!). Ben Good and friends have submitted a paper on their Entity Describer which extends connotea using some Semantic Web goodness. They'd appreciate your comments on their submitted manuscript over at i9606. As Ben says, their pre-publication turns out to be an interesting experiment "figuring out how blogging might fit into the academic publishing landscape". If this interests you, get commenting now!


Scifoo day 3: Genome voyeurism with Lincoln Stein


Lincoln Stein: Association Analysis Screen
On day three of Science Foo Camp (scifoo) biologist Lincoln Stein (picture right) gave a presenation on what he calls "genome voyeurism", using Jim Watsons genome as an example. This session demonsrated the current and future possibilities of individuals having their own DNA sequenced, what has been called "personal genomics".


Scifoo day two: Good Morning Mashup

Vince Smith, Brian Berman, Paul Ginsparg, Linda Miller, John SantiniSome of the most interesting conversations you have at Science Foo Camp (scifoo) are in the corridors, foo bars and even the bus that shuttles between the Googleplex and the hotel...


Debugging Web Services

IMGP4014There are a growing number of biomedical services out there on Wild Wild Web for performing various computations on DNA, RNA and proteins as well as the associated scientific literature. Currently, using and debugging these services can be hard work. SOAP UI (SOAP User Interface) is newish and handy free tool to help debug services and get your in silico experiments and analyses done, hopefully more easily.


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